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pull nf-core and update pmultiqc #152

Merged
merged 20 commits into from
Apr 9, 2022
Merged

pull nf-core and update pmultiqc #152

merged 20 commits into from
Apr 9, 2022

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daichengxin
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PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
    • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
    • If necessary, also make a PR on the nf-core/quantms branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

jpfeuffer and others added 20 commits March 24, 2022 16:41
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github-actions bot commented Apr 9, 2022 •
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nf-core lint overall result: Passed ✅ ⚠️

Posted for pipeline commit cb7631d

+| ✅ 145 tests passed       |+
#| ❔   1 tests were ignored |#
!| ❗   1 tests had warnings |!

❗ Test warnings:

❔ Tests ignored:

✅ Tests passed:

Run details

  • nf-core/tools version 2.3.2
  • Run at 2022-04-09 06:37:49

This was referenced Apr 9, 2022
Closed
Closed
This was linked to issues Apr 9, 2022
DIA-NN and pmultiqc #121
Closed
when pmultiqc is disable, then summary pipeline fails #151
Closed
@ypriverol ypriverol self-requested a review April 9, 2022 06:50
@ypriverol ypriverol merged commit 2d4b41d into bigbio:dev Apr 9, 2022
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@ypriverol ypriverol ypriverol approved these changes

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Successfully merging this pull request may close these issues.

when pmultiqc is disable, then summary pipeline fails DIA-NN and pmultiqc
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@daichengxin @ypriverol @jpfeuffer